Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808424.1_cds_XP_016495328.1_9655
CDS Infomation

[gene=LOC107814428] [db_xref=GeneID:107814428] [protein=protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like] [protein_id=XP_016495328.1] [location=join(30232..30468,30801..30910,31619..31739,37967..38062,38811..39293)] [gbkey=CDS]
Sequence

ATGGATACTGGCGAAGATAAGCGAACGCGAATCCCGTTCAAGGAAAGGCCTGAATGGGCC
GATGTGAAGCCCGTTCCGCAAGACGACGGGCCCTGCCCGGTGGTTCCAATAGCCTACACC
GAAGACTTCTCGGAAACCATGGATTATTTCCGGGCAATCTACTTAGACGACGAGCGGTCT
CCACGCGCCCTTCAGCTTACTGCTGAAGCTATTCCGTTAAACCCTGGAAATTACACTGTA
TGGCAATTCAGGCGAGTTGTGCTGGAGGCACTGGGTGTTGATTTACATGAAGAATTGAAG
TTTGTTGATCGCATTGCTGGGGAGAACACAAAAAATTATCAAATATGGCATCATAGACGA
TGGCTTGCTGAGAAGCTGCGAACTGATGCTGTGACAAATGAGCTAGAATTCACCAAGAAA
ATATTTTCTCAGGATGCAAAAAATTATCATGCTTGGTCCCATCGGCAGTGGGTCCTTCAA
GCTCTTGGCGGATGGGAAAATGAGCTTGCCTATTGTCAACAACTCCTCGAAGATGATATT
TACAACAATTCTGCTTGGAATCAGAGATACTTTGTTGTGACACGATCACCTCTATTAGGG
GGCCTAGCGGCAATGAGGGAATTAGAAGTGAATTACACAGTTCAAGCCCTCAGAGCTAGT
CCGGAGAATGAAAGTCCTTGGAGGTATCTTCGTGGTCTTTACAAGAATGATACACAATCT
CTAGTTGAGGATTCTCAAGTAGCATCGGTGCTTTTGGATGTTTTAACCTCCAAAAATAAT
CATGTGCATGCTCTGAGCTTGCTGTTGGATCTTCTCAGTCATGGTTTTGAACCAAGGGAA
GAATTAAAAAGTGCAGTAGATGTTCTTACTCCACAGTCATGCTCTCCGGATTTACCCTTG
GCGAAGAGAATTTGTTCCATCTTGGAACATGCTGATCCAATGAGAATAAACTATTGGAAT
TGGCGCAAAAGCACTATTCCTGTTCAATCAGCTAAATGCCAGAATACTGATAGGTTGGCT
GATTTAAGCATGCAGGATAACTTGTAG

Peptide Sequence

PEP ID

XP_016495328.1
PEP Infomation

PREDICTED: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like [Nicotiana tabacum]
Sequence

MDTGEDKRTRIPFKERPEWADVKPVPQDDGPCPVVPIAYTEDFSETMDYFRAIYLDDERS
PRALQLTAEAIPLNPGNYTVWQFRRVVLEALGVDLHEELKFVDRIAGENTKNYQIWHHRR
WLAEKLRTDAVTNELEFTKKIFSQDAKNYHAWSHRQWVLQALGGWENELAYCQQLLEDDI
YNNSAWNQRYFVVTRSPLLGGLAAMRELEVNYTVQALRASPENESPWRYLRGLYKNDTQS
LVEDSQVASVLLDVLTSKNNHVHALSLLLDLLSHGFEPREELKSAVDVLTPQSCSPDLPL
AKRICSILEHADPMRINYWNWRKSTIPVQSAKCQNTDRLADLSMQDNL

Transcript Sequence

Gene sequence data has not been registered.